Hello,
I'm running the following commandline:
vcf2bed < in.vcf > out.bed
and I'm getting this error:
Exception in thread Thread-1:
Traceback (most recent call last):
File "/illumina/thirdparty/python/python-2.7.5/lib/python2.7/threading.py", line 808, in __bootstrap_inner
self.run()
File "/illumina/thirdparty/python/python-2.7.5/lib/python2.7/threading.py", line 761, in run
self.__target(*self.__args, **self.__kwargs)
File "/illumina/thirdparty/bedops/bedops_linux_x86_64-v2.4.2/bin/vcf2bed", line 192, in consumeVCF
bed_line = convertVCFToBed(vcf_line, params, to_stream)
File "/illumina/thirdparty/bedops/bedops_linux_x86_64-v2.4.2/bin/vcf2bed", line 222, in convertVCFToBed
for columnIdx in range(len(params.columns)):
TypeError: object of type 'NoneType' has no len()
Thank you.
